Pathways Knowlegdes
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| Pathway | DOIs | Note |
|---|---|---|
| gluconeogenesis I Accession ID: BioCyc:ECO_GLUCONEO-PWY |
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Hines JK, Fromm HJ, Honzatko RB. Novel Allosteric Activation Site in Escherichia coli Fructose-1,6-bisphosphatase. Journal of Biological Chemistry. 2006 Jul;281(27):18386–93. doi: 10.1074/jbc.m602553200.; Sauer U, Eikmanns BJ. The PEP—pyruvate—oxaloacetate node as the switch point for carbon flux distribution in bacteria: We dedicate this paper to Rudolf K. Thauer, Director of the Max-Planck-Institute for Terrestrial Microbiology in Marburg, Germany, on the occasion of his 65th birthday. FEMS Microbiol Rev. 2005 Sep;29(4):765–94. doi: 10.1016/j.femsre.2004.11.002.; Peng L, Shimizu K. Global metabolic regulation analysis for Escherichia coli K12 based on protein expression by 2-dimensional electrophoresis and enzyme activity measurement. Applied Microbiology and Biotechnology. 2003 Jan 09;61(2):163–78. doi: 10.1007/s00253-002-1202-6.; Chao YP, Patnaik R, Roof WD, Young RF, Liao JC. Control of gluconeogenic growth by pps and pck in Escherichia coli. J Bacteriol. 1993 Nov;175(21):6939–44. doi: 10.1128/jb.175.21.6939-6944.1993. |
| sulfate activation for sulfonation Accession ID: BioCyc:YEAST_PWY-5340 |
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| glucosinolate activation Accession ID: BioCyc:ARA_PWY-5267 |
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Barth C, Jander G. Arabidopsis myrosinases TGG1 and TGG2 have redundant function in glucosinolate breakdown and insect defense. Plant J. 2006 May;46(4):549–62. doi: 10.1111/j.1365-313x.2006.02716.x. PMID: 16640593.; Grubb CD, Abel S. Glucosinolate metabolism and its control. Trends Plant Sci. 2006 Feb;11(2):89–100. doi: 10.1016/j.tplants.2005.12.006. PMID: 16406306.; Kliebenstein DJ, Kroymann J, Mitchell-Olds T. The glucosinolate-myrosinase system in an ecological and evolutionary context. Curr Opin Plant Biol. 2005 Jun;8(3):264–71. doi: 10.1016/j.pbi.2005.03.002. PMID: 15860423.; Lambrix V, Reichelt M, Mitchell-Olds T, Kliebenstein DJ, Gershenzon J. The Arabidopsis epithiospecifier protein promotes the hydrolysis of glucosinolates to nitriles and influences Trichoplusia ni herbivory. Plant Cell. 2001 Dec;13(12):2793–807. PMID: 11752388; PMCID: PMC139489. |
| sulfate activation for sulfonation Accession ID: BioCyc:ARA_PWY-5340 |
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| sulfate reduction I (assimilatory) Accession ID: BioCyc:VCHO_SO4ASSIM-PWY |
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| superpathway of sulfate assimilation and cysteine biosynthesis Accession ID: BioCyc:SHIGELLA_SULFATE-CYS-PWY |
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| superpathway of L-methionine biosynthesis (by sulfhydrylation) Accession ID: BioCyc:MTBH37RV_PWY-5345 |
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| superpathway of sulfate assimilation and cysteine biosynthesis Accession ID: BioCyc:MTBH37RV_SULFATE-CYS-PWY |
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| superpathway of sulfate assimilation and cysteine biosynthesis Accession ID: BioCyc:CAULO_SULFATE-CYS-PWY |
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| superpathway of L-methionine biosynthesis (by sulfhydrylation) Accession ID: BioCyc:AGRO_PWY-5345 |
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| sulfate activation for sulfonation Accession ID: BioCyc:AGRO_PWY-5340 |
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| sulfite oxidation III Accession ID: BioCyc:AURANTIMONAS_PWY-5278 |
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| superpathway of L-methionine biosynthesis (by sulfhydrylation) Accession ID: BioCyc:AURANTIMONAS_PWY-5345 |
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| superpathway of sulfate assimilation and cysteine biosynthesis Accession ID: BioCyc:AURANTIMONAS_SULFATE-CYS-PWY |
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| sulfate activation for sulfonation Accession ID: BioCyc:AURANTIMONAS_PWY-5340 |
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| sulfate activation for sulfonation Accession ID: BioCyc:MOUSE_PWY-5340 |
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| sulfate reduction I (assimilatory) Accession ID: BioCyc:SCO_SO4ASSIM-PWY-1 |
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| superpathway of sulfate assimilation and cysteine biosynthesis Accession ID: BioCyc:SCO_SULFATE-CYS-PWY |
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Kanehisa M, Goto S. KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 2000 Jan 01;28(1):27–30. PMID: 10592173; PMCID: PMC102409. |
| sulfate activation for sulfonation Accession ID: BioCyc:BSUB_PWY-5340 |
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| assimilatory sulfate reduction I Accession ID: BioCyc:BSUB_SO4ASSIM-PWY |
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