Pathways Knowlegdes

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Pathway DOIs Note
4-aminobutyrate degradation I

Accession ID: BioCyc:TRYPANO_PWY-6535		 -
4-aminobutyrate degradation II

Accession ID: BioCyc:TRYPANO_PWY-6537		 -
superpathway of 4-aminobutyrate degradation

Accession ID: BioCyc:TRYPANO_4AMINOBUTMETAB-PWY		 -
glutamate degradation to succinate

Accession ID: BioCyc:CALBI_GLUDEG-I-PWY
  • 10.1074/jbc.m007103200
  • 10.1111/j.1432-1033.1985.tb08939.x
  • 10.1271/bbb.80544
 MASUDA K, GUO X, URYU N, HAGIWARA T, WATABE S. Isolation of Marine Yeasts Collected from the Pacific Ocean Showing a High Production of ?-Aminobutyric Acid. Bioscience, Biotechnology, and Biochemistry. 2008 Dec 23;72(12):3265–72. doi: 10.1271/bbb.80544.; Coleman ST, Fang TK, Rovinsky SA, Turano FJ, Moye-Rowley WS. Expression of a Glutamate Decarboxylase Homologue Is Required for Normal Oxidative Stress Tolerance in Saccharomyces cerevisiae. Journal of Biological Chemistry. 2001 Jan;276(1):244–50. doi: 10.1074/jbc.m007103200.; RAMOS F, El GUEZZAR M, GRENSON M, WIAME J. Mutations affecting the enzymes involved in the utilization of 4-aminobutyric acid as nitrogen source by the yeast Saccharomyces cerevisiae. European Journal of Biochemistry. 1985 Jun;149(2):401–4. doi: 10.1111/j.1432-1033.1985.tb08939.x.
superpathway of arginine and ornithine degradation

Accession ID: BioCyc:TRYPANO_ORNARGDEG-PWY		 -
superpathway of arginine, putrescine, and 4-aminobutyrate degradation

Accession ID: BioCyc:TRYPANO_ARGDEG-PWY		 -
GABA degradation

Accession ID: BioCyc:CALBI_4AMINOBUTMETAB-PWY
  • 10.1002/yea.697
  • 10.1016/0300-9084(89)90180-6
  • 10.1016/0378-1097(91)90334-7
  • 10.1016/0378-1097(92)90806-y
  • 10.1111/j.1432-1033.1985.tb08939.x
  • 10.1111/j.1432-1033.1986.tb09618.x
 McNemar MD, Gorman JA, Buckley HR. Isolation of a gene encoding a putative polyamine transporter from Candida albicans, GPT1. Yeast. 2001 Apr;18(6):555–61. doi: 10.1002/yea.697. PMID: 11284011.; Large PJ. Enzymes and pathways of polyamine breakdown in microorganisms. FEMS Microbiol Rev. 1992 Jun;8(3-4):249–62. doi: 10.1111/j.1574-6968.1992.tb04991.x. PMID: 1515162.; Large PJ, Robertson A. The route of lysine breakdown in Candida tropicalis. FEMS Microbiol Lett. 1991 Aug 01;66(2):209–13. doi: 10.1016/0378-1097(91)90334-7. PMID: 1682209.; Der Garabedian PA, Vermeersch JJ. Lysine degradation in Candida. Characterization and probable role of L-norleucine-leucine, 4-aminobutyrate and delta-aminovalerate:2-oxoglutarate aminotransferases. Biochimie. 1989 Apr;71(4):497–503. doi: 10.1016/0300-9084(89)90180-6. PMID: 2503054.; Der Garabedian PA, Lotti AM, Vermeersch JJ. 4-Aminobutyrate:2-oxoglutarate aminotransferase from Candida. Purification and properties. Eur J Biochem. 1986 May 02;156(3):589–96. doi: 10.1111/j.1432-1033.1986.tb09618.x. PMID: 3699025.; RAMOS F, El GUEZZAR M, GRENSON M, WIAME J. Mutations affecting the enzymes involved in the utilization of 4-aminobutyric acid as nitrogen source by the yeast Saccharomyces cerevisiae. European Journal of Biochemistry. 1985 Jun;149(2):401–4. doi: 10.1111/j.1432-1033.1985.tb08939.x.
Arginine Metabolism

Accession ID: PathBank:SMP0000812		 -
Ornithine Metabolism

Accession ID: PathBank:SMP0000813		 -
4-Aminobutanoate Degradation I

Accession ID: PathBank:SMP0002080		 -
Metabolism and regulation

Accession ID: Plant Reactome:R-OAU-2744345		 -
Amino acid metabolism

Accession ID: Plant Reactome:R-OAU-2744343		 -
Metabolism and regulation

Accession ID: Plant Reactome:R-MES-2744345		 -
Amino acid metabolism

Accession ID: Plant Reactome:R-MES-2744343		 -
Amino acid catabolism

Accession ID: Plant Reactome:R-MES-5655124		 -
Metabolism and regulation

Accession ID: Plant Reactome:R-TDI-2744345		 -
Amino acid metabolism

Accession ID: Plant Reactome:R-TDI-2744343		 -
Metabolism and regulation

Accession ID: Plant Reactome:R-PTI-2744345		 -
Amino acid metabolism

Accession ID: Plant Reactome:R-PTI-2744343		 -
Amino acid catabolism

Accession ID: Plant Reactome:R-PTI-5655124		 -