Succinate semialdehyde (BioCAD00000018048)

cerebrospinal fluid (csf) urine testis

Metabolite Card

Formula: C4H6O3 (102.0317)
SMILES: OC(=O)CCC=O

Synonyms [en]

Succinic acid semialdehyde; succinate semialdehyde; 4-Oxobutanoic acid; succinic semialdehyde; beta-Formylpropionic acid; 3-Formylpropanoic acid

Reviewed

Last reviewed on 2024-06-28.

Cite this Page

Succinate semialdehyde. 数据之源,洞见之始. SMRUCC genomics institute, a synthetic life researcher from China. https://biocad_registry.innovation.ac.cn/s/(-)-arctiin (retrieved 2026-01-03) (CAD Registry RN: BioCAD00000018048). Licensed under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).

Note

Succinic acid semialdehyde (or succinate semialdehyde) is an intermediate in the catabolism of gamma-aminobutyrate or GABA (PMID:16435183). It is formed from GABA by the action of GABA transaminase, which leads to the production of succinate semialdehyde and alanine. The resulting succinate semialdehyde is further oxidized by succinate semialdehyde dehydrogenase to become succinic acid, which also yields NADPH. Under certain situations, high levels of succinate semialdehyde can function as a neurotoxin and a metabotoxin. A neurotoxin is a compound that causes damage to the brain and nerve tissues. A metabotoxin is an endogenously produced metabolite that causes adverse health effects at chronically high levels. Elevated serum levels of succinate semialdehyde are found in succinic semialdehyde dehydrogenase (SSADH) deficiency (gamma-hydroxybutyric aciduria), a rare neurometabolic disorder of gamma-aminobutyric acid (GABA) degradation. Symptoms include motor delay, hypotonia, speech delay, autistic features, seizures, and ataxia. Patients also exhibit behavioural problems such as attention deficit, hyperactivity, anxiety, or aggression (PMID:18622364). Succinate semialdehyde is considered a reactive carbonyl and may lead to increased oxidative stress. This stress is believed to contribute to the formation of free radicals in the brain tissue of animal models induced with SSADH deficiency, which further leads to secondary cell damage and death. Additionally, oxidative stress may be responsible for the loss of striatal dopamine, which may contribute to the neuropathology of SSADH deficiency.

Entity Information

DBLinks

Other DBLinks
  • CAS Registry Number: 692-29-5
  • PubChem: 1112
  • ChEBI: ChEBI:16265
  • HMDB: HMDB0001259
  • HMDB: HMDB01259
  • LipidMaps: LMFA06000118
  • KEGG: C00232
  • NCBI MeSH: succinic semialdehyde
  • Wikipedia: Succinic semialdehyde
  • Wikipedia: Succinic_semialdehyde
  • DrugBank: DBMET01476
  • RefMet: RM0150633
  • MoNA: BAF_UVA_POS000772
  • MoNA: EMBL-MCF_spec25759
  • MoNA: FiehnLib000751
  • MoNA: FiehnLib000752
  • MoNA: HMDB0001259_c_ms_950
  • MoNA: HMDB0001259_c_ms_953
  • MoNA: HMDB0001259_ms_ms_1493
  • MoNA: PS062501
  • MoNA: PS062506
  • Metlin: METLIN_275
  • Coconut NaturalProduct: CNP0318740.0

Class / Ontology

Metabolic Network
ID EC Number Name
KEGG:R00272 4.1.1.71 2-oxoglutarate carboxy-lyase
KEGG:R00713 1.2.1.16 succinate-semialdehyde:NAD+ oxidoreductase
KEGG:R00714 1.2.1.16 succinate-semialdehyde:NADP+ oxidoreductase
KEGG:R01644 1.1.1.61 4-hydroxybutanoate:NAD+ oxidoreductase
KEGG:R01645 4.1.2.52 4-hydroxy-2-oxo-heptandioate succinate-semialdehyde-lyase (pyruvate-forming)
KEGG:R01647 4.1.2.52 2,4-dihydroxyhept-2-enedioate succinate-semialdehyde-lyase (pyruvate-forming)
KEGG:R01648 2.6.1.19 4-aminobutanoate:2-oxoglutarate aminotransferase
KEGG:R01649 3.5.1.29 2-(acetamidomethylene)succinate amidohydrolase (deaminating, decarboxylating)
KEGG:R01650 C00232 + C01326 + C00014<=>C05715 + C00001
KEGG:R09280 1.2.1.76 succinate-semialdehyde:NADP+ oxidoreductase (CoA-acylating)
KEGG:R09281 1.1.1.- 4-hydroxybutanoate:NADP+ oxidoreductase
KEGG:R09472 1.14.13.163 4-(6-hydroxypyridin-3-yl)-4-oxobutanoate,NADH:oxygen oxidoreductase (3-hydroxylating, succinate semialdehyde releasing)
KEGG:R10101 1.5.3.21 4-methylaminobutanoate methylamidohydrolase;
KEGG:R10178 2.6.1.96 4-aminobutanoate:pyruvate aminotransferase
KEGG:R10179 2.6.1.96 4-aminobutanoate:glyoxylate aminotransferase
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Organism Source

Taxonomy Source

  1. Aristotelia peduncularis [ncbi taxid: 140414]
  2. Chaetomium minutum [ncbi taxid: ]
  3. Citrullus lanatus [ncbi taxid: 3654]
  4. Dermocybe icterinoides [ncbi taxid: ]
  5. Escherichia coli [ncbi taxid: 562]
  6. Escherichia coli K12 [ncbi taxid: ]
  7. Genista januensis [ncbi taxid: 49824]
  8. Homo sapiens [ncbi taxid: 9606]
  9. Mitrephora vulpina [ncbi taxid: ]
  10. Mus musculus [ncbi taxid: 10090]
  11. Panax pseudoginseng [ncbi taxid: 44681]
  12. Psilocybe subaeruginosa [ncbi taxid: 181776]
  13. Saccharomyces cerevisiae [ncbi taxid: 4932]

Pathway Synthetic

pathway id name
BioCyc:TRYPANO_PWY-6535 4-aminobutyrate degradation I
BioCyc:TRYPANO_PWY-6537 4-aminobutyrate degradation II
BioCyc:TRYPANO_4AMINOBUTMETAB-PWY superpathway of 4-aminobutyrate degradation
BioCyc:CALBI_GLUDEG-I-PWY glutamate degradation to succinate
BioCyc:TRYPANO_ORNARGDEG-PWY superpathway of arginine and ornithine degradation
BioCyc:TRYPANO_ARGDEG-PWY superpathway of arginine, putrescine, and 4-aminobutyrate degradation
BioCyc:CALBI_4AMINOBUTMETAB-PWY GABA degradation
PathBank:SMP0000812 Arginine Metabolism
PathBank:SMP0000813 Ornithine Metabolism
PathBank:SMP0002080 4-Aminobutanoate Degradation I
Plant Reactome:R-OAU-2744345 Metabolism and regulation
Plant Reactome:R-OAU-2744343 Amino acid metabolism
Plant Reactome:R-MES-2744345 Metabolism and regulation
Plant Reactome:R-MES-2744343 Amino acid metabolism
Plant Reactome:R-MES-5655124 Amino acid catabolism
Plant Reactome:R-TDI-2744345 Metabolism and regulation
Plant Reactome:R-TDI-2744343 Amino acid metabolism
Plant Reactome:R-PTI-2744345 Metabolism and regulation
Plant Reactome:R-PTI-2744343 Amino acid metabolism
Plant Reactome:R-PTI-5655124 Amino acid catabolism
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