Succinate semialdehyde (BioCAD00000018048)
Metabolite Card
Formula: C4H6O3 (102.0317)
SMILES: OC(=O)CCC=O
Synonyms [en]
Succinic acid semialdehyde; succinate semialdehyde; 4-Oxobutanoic acid; succinic semialdehyde; beta-Formylpropionic acid; 3-Formylpropanoic acid
Last reviewed on 2024-06-28.
Cite this Page
Succinate semialdehyde. 数据之源,洞见之始. SMRUCC genomics institute, a synthetic life researcher from China.
https://biocad_registry.innovation.ac.cn/s/(-)-arctiin
(retrieved
2026-01-03) (CAD Registry RN: BioCAD00000018048). Licensed
under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).
Note
Succinic acid semialdehyde (or succinate semialdehyde) is an intermediate in the catabolism of gamma-aminobutyrate or GABA (PMID:16435183). It is formed from GABA by the action of GABA transaminase, which leads to the production of succinate semialdehyde and alanine. The resulting succinate semialdehyde is further oxidized by succinate semialdehyde dehydrogenase to become succinic acid, which also yields NADPH. Under certain situations, high levels of succinate semialdehyde can function as a neurotoxin and a metabotoxin. A neurotoxin is a compound that causes damage to the brain and nerve tissues. A metabotoxin is an endogenously produced metabolite that causes adverse health effects at chronically high levels. Elevated serum levels of succinate semialdehyde are found in succinic semialdehyde dehydrogenase (SSADH) deficiency (gamma-hydroxybutyric aciduria), a rare neurometabolic disorder of gamma-aminobutyric acid (GABA) degradation. Symptoms include motor delay, hypotonia, speech delay, autistic features, seizures, and ataxia. Patients also exhibit behavioural problems such as attention deficit, hyperactivity, anxiety, or aggression (PMID:18622364). Succinate semialdehyde is considered a reactive carbonyl and may lead to increased oxidative stress. This stress is believed to contribute to the formation of free radicals in the brain tissue of animal models induced with SSADH deficiency, which further leads to secondary cell damage and death. Additionally, oxidative stress may be responsible for the loss of striatal dopamine, which may contribute to the neuropathology of SSADH deficiency.
DBLinks
- CAS Registry Number: 692-29-5
- PubChem CID: 1112
- ChEBI: 16265
- HMDB: HMDB0001259
- LipidMaps: LMFA06000118
- KEGG: C00232
- BioCyc:
- NCBI MeSH: succinic semialdehyde
- Wikipedia: Succinic semialdehyde
Other DBLinks
- CAS Registry Number: 692-29-5
- PubChem: 1112
- ChEBI: ChEBI:16265
- HMDB: HMDB0001259
- HMDB: HMDB01259
- LipidMaps: LMFA06000118
- KEGG: C00232
- NCBI MeSH: succinic semialdehyde
- Wikipedia: Succinic semialdehyde
- Wikipedia: Succinic_semialdehyde
- DrugBank: DBMET01476
- RefMet: RM0150633
- MoNA: BAF_UVA_POS000772
- MoNA: EMBL-MCF_spec25759
- MoNA: FiehnLib000751
- MoNA: FiehnLib000752
- MoNA: HMDB0001259_c_ms_950
- MoNA: HMDB0001259_c_ms_953
- MoNA: HMDB0001259_ms_ms_1493
- MoNA: PS062501
- MoNA: PS062506
- Metlin: METLIN_275
- Coconut NaturalProduct: CNP0318740.0
Class / Ontology
- WishartLab ClassyFire: [Fatty acids and conjugates] Fatty acids and conjugates
- RefMet: [Fatty aldehydes] Fatty aldehydes
- LipidMaps: [Fatty aldehydes [FA06]] Fatty aldehydes [FA06]
- ChEBI: [CHEBI:16265] succinic semialdehyde
- Coconut NaturalProduct: [Fatty aldehydes] Fatty aldehydes
| ID | EC Number | Name |
|---|---|---|
| KEGG:R00272 | 4.1.1.71 | 2-oxoglutarate carboxy-lyase |
| KEGG:R00713 | 1.2.1.16 | succinate-semialdehyde:NAD+ oxidoreductase |
| KEGG:R00714 | 1.2.1.16 | succinate-semialdehyde:NADP+ oxidoreductase |
| KEGG:R01644 | 1.1.1.61 | 4-hydroxybutanoate:NAD+ oxidoreductase |
| KEGG:R01645 | 4.1.2.52 | 4-hydroxy-2-oxo-heptandioate succinate-semialdehyde-lyase (pyruvate-forming) |
| KEGG:R01647 | 4.1.2.52 | 2,4-dihydroxyhept-2-enedioate succinate-semialdehyde-lyase (pyruvate-forming) |
| KEGG:R01648 | 2.6.1.19 | 4-aminobutanoate:2-oxoglutarate aminotransferase |
| KEGG:R01649 | 3.5.1.29 | 2-(acetamidomethylene)succinate amidohydrolase (deaminating, decarboxylating) |
| KEGG:R01650 | C00232 + C01326 + C00014<=>C05715 + C00001 | |
| KEGG:R09280 | 1.2.1.76 | succinate-semialdehyde:NADP+ oxidoreductase (CoA-acylating) |
| KEGG:R09281 | 1.1.1.- | 4-hydroxybutanoate:NADP+ oxidoreductase |
| KEGG:R09472 | 1.14.13.163 | 4-(6-hydroxypyridin-3-yl)-4-oxobutanoate,NADH:oxygen oxidoreductase (3-hydroxylating, succinate semialdehyde releasing) |
| KEGG:R10101 | 1.5.3.21 | 4-methylaminobutanoate methylamidohydrolase; |
| KEGG:R10178 | 2.6.1.96 | 4-aminobutanoate:pyruvate aminotransferase |
| KEGG:R10179 | 2.6.1.96 | 4-aminobutanoate:glyoxylate aminotransferase |
Taxonomy Source
- Aristotelia peduncularis [ncbi taxid: 140414]
- Chaetomium minutum [ncbi taxid: ]
- Citrullus lanatus [ncbi taxid: 3654]
- Dermocybe icterinoides [ncbi taxid: ]
- Escherichia coli [ncbi taxid: 562]
- Escherichia coli K12 [ncbi taxid: ]
- Genista januensis [ncbi taxid: 49824]
- Homo sapiens [ncbi taxid: 9606]
- Mitrephora vulpina [ncbi taxid: ]
- Mus musculus [ncbi taxid: 10090]
- Panax pseudoginseng [ncbi taxid: 44681]
- Psilocybe subaeruginosa [ncbi taxid: 181776]
- Saccharomyces cerevisiae [ncbi taxid: 4932]
Pathway Synthetic
| pathway id | name |
|---|---|
| BioCyc:TRYPANO_PWY-6535 | 4-aminobutyrate degradation I |
| BioCyc:TRYPANO_PWY-6537 | 4-aminobutyrate degradation II |
| BioCyc:TRYPANO_4AMINOBUTMETAB-PWY | superpathway of 4-aminobutyrate degradation |
| BioCyc:CALBI_GLUDEG-I-PWY | glutamate degradation to succinate |
| BioCyc:TRYPANO_ORNARGDEG-PWY | superpathway of arginine and ornithine degradation |
| BioCyc:TRYPANO_ARGDEG-PWY | superpathway of arginine, putrescine, and 4-aminobutyrate degradation |
| BioCyc:CALBI_4AMINOBUTMETAB-PWY | GABA degradation |
| PathBank:SMP0000812 | Arginine Metabolism |
| PathBank:SMP0000813 | Ornithine Metabolism |
| PathBank:SMP0002080 | 4-Aminobutanoate Degradation I |
| Plant Reactome:R-OAU-2744345 | Metabolism and regulation |
| Plant Reactome:R-OAU-2744343 | Amino acid metabolism |
| Plant Reactome:R-MES-2744345 | Metabolism and regulation |
| Plant Reactome:R-MES-2744343 | Amino acid metabolism |
| Plant Reactome:R-MES-5655124 | Amino acid catabolism |
| Plant Reactome:R-TDI-2744345 | Metabolism and regulation |
| Plant Reactome:R-TDI-2744343 | Amino acid metabolism |
| Plant Reactome:R-PTI-2744345 | Metabolism and regulation |
| Plant Reactome:R-PTI-2744343 | Amino acid metabolism |
| Plant Reactome:R-PTI-5655124 | Amino acid catabolism |