Shigella boydii
ncbi_taxid: 621 - Shigella boydii(species); all_childs: 300268, 344609, 766138, 766139, 766140, 1118236, 1212567, 1212570, 1212573, 1212574, 1212575, 1212576, 1212577, 1212579
taxonomy name: Shigella boydii (species)
ancestor: Shigella (genus)
Child Taxonomy
| taxonomy name | rank | note |
|---|---|---|
| Shigella boydii Sb227 | strain | ncbi_taxid: 300268 - Shigella boydii Sb227(strain); all_childs: |
| Shigella boydii CDC 3083-94 | strain | ncbi_taxid: 344609 - Shigella boydii CDC 3083-94(strain); all_childs: |
| Shigella boydii 965-58 | strain | ncbi_taxid: 766138 - Shigella boydii 965-58(strain); all_childs: |
| Shigella boydii 3594-74 | strain | ncbi_taxid: 766139 - Shigella boydii 3594-74(strain); all_childs: |
| Shigella boydii 4444-74 | strain | ncbi_taxid: 766140 - Shigella boydii 4444-74(strain); all_childs: |
| Shigella boydii 08-0009 | strain | ncbi_taxid: 1118236 - Shigella boydii 08-0009(strain); all_childs: |
| Shigella boydii S6614 | strain | ncbi_taxid: 1212567 - Shigella boydii S6614(strain); all_childs: |
| Shigella boydii S7334 | strain | ncbi_taxid: 1212570 - Shigella boydii S7334(strain); all_childs: |
| Shigella boydii 08-0280 | strain | ncbi_taxid: 1212573 - Shigella boydii 08-0280(strain); all_childs: |
| Shigella boydii 08-2671 | strain | ncbi_taxid: 1212574 - Shigella boydii 08-2671(strain); all_childs: |
| Shigella boydii 08-2675 | strain | ncbi_taxid: 1212575 - Shigella boydii 08-2675(strain); all_childs: |
| Shigella boydii 08-6341 | strain | ncbi_taxid: 1212576 - Shigella boydii 08-6341(strain); all_childs: |
| Shigella boydii 09-0344 | strain | ncbi_taxid: 1212577 - Shigella boydii 09-0344(strain); all_childs: |
| Shigella boydii 248-1B | strain | ncbi_taxid: 1212579 - Shigella boydii 248-1B(strain); all_childs: |
Enzyme Proteins
| protein id | name | ec_number | function |
|---|---|---|---|
| P41578 [UniProt] | gnd | 1.1.1.44 | 6-phosphogluconate dehydrogenase, decarboxylating |
| P0A6B6 [UniProt] | alr | 5.1.1.1 | Alanine racemase, biosynthetic |
| Q59827 [UniProt] | dgt | 3.1.5.1 | Deoxyguanosinetriphosphate triphosphohydrolase |
| A0A3Z7J6R4 [UniProt] | ospZ | 2.1.1.- | Cysteine S-methyltransferase OspZ |
| Q2ET28 [UniProt] | ospF | 4.2.3.- | Phosphothreonine lyase OspF |
| B5L3X1 [UniProt] | wfeD | 2.4.1.304 | UDP-Gal:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,4-galactosyltransferase |
Metabolites
LCMS Annotations
Literature Annotations
| Metabolite | Database Reference | Structure |
|---|---|---|
| Liriodenine Formula: C17H9NO3 Exact Mass: 275.0582 Source ID: CNP0321376.0 |
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Formula: C36H57NO4 Exact Mass: 567.4287 Source ID: CNP0291182.1 |
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Formula: C6H12N2O2 Exact Mass: 144.0899 Source ID: CNP0298876.1 |
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Formula: C36H55NO3 Exact Mass: 549.4182 Source ID: CNP0116419.1 |
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Formula: C36H55NO4 Exact Mass: 565.4131 Source ID: CNP0285062.1 |
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Formula: C34H55NO3 Exact Mass: 525.4182 Source ID: CNP0125367.1 |
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Formula: C19H19NO3 Exact Mass: 309.1365 Source ID: CNP0164252.0 |
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Formula: C18H23NO2 Exact Mass: 285.1729 Source ID: CNP0228773.1 |
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Formula: C18H23NO Exact Mass: 269.178 Source ID: CNP0372730.1 |
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Formula: C18H23NO2 Exact Mass: 285.1729 Source ID: CNP0112400.1 |
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| 7H-Benzo(g)-1,3-benzodioxolo(6,5,4-de)quinoline-7-carboxaldehyde,5,6,7a,8-tetrahydro-, (7aR)- Formula: C18H15NO3 Exact Mass: 293.1052 Source ID: CNP0291567.1 |
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Formula: C18H23NO2 Exact Mass: 285.1729 Source ID: CNP0150658.1 |
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Formula: C18H23NO Exact Mass: 269.178 Source ID: CNP0289133.1 |
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Formula: C18H16N2O3 Exact Mass: 308.1161 Source ID: CNP0318126.1 |
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Formula: C18H23NO2 Exact Mass: 285.1729 Source ID: CNP0150658.2 |
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Formula: C34H55NO3 Exact Mass: 525.4182 Source ID: CNP0354665.1 |
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Formula: C36H55NO3 Exact Mass: 549.4182 Source ID: CNP0180241.1 |
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Formula: C18H25NO2 Exact Mass: 287.1885 Source ID: CNP0330969.1 |
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| (-)-Annonaine Formula: C17H15NO2 Exact Mass: 265.1103 Source ID: CNP0155056.1 |
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Formula: C34H55NO3 Exact Mass: 525.4182 Source ID: CNP0354665.2 |
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Formula: C36H55NO4 Exact Mass: 565.4131 Source ID: CNP0149105.1 |
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Formula: C18H23NO Exact Mass: 269.178 Source ID: CNP0289133.2 |
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Formula: C34H55NO4 Exact Mass: 541.4131 Source ID: CNP0319179.1 |
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Formula: C18H18N2O3 Exact Mass: 310.1317 Source ID: CNP0109856.1 |
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Formula: C18H23NO2 Exact Mass: 285.1729 Source ID: CNP0252963.1 |
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| Squamolone Formula: C5H8N2O2 Exact Mass: 128.0586 Source ID: CNP0193817.0 |
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Formula: C36H57NO3 Exact Mass: 551.4338 Source ID: CNP0272828.1 |
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| R-(-)-3-hydroxynornuciferine Formula: C18H19NO3 Exact Mass: 297.1365 Source ID: CNP0161661.1 |
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Formula: C18H25NO3 Exact Mass: 303.1834 Source ID: CNP0124844.1 |
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| N-Nornuciferine Formula: C18H19NO2 Exact Mass: 281.1416 Source ID: CNP0111644.2 |
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Formula: C36H55NO3 Exact Mass: 549.4182 Source ID: CNP0180241.2 |
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Formula: C36H57NO3 Exact Mass: 551.4338 Source ID: CNP0161159.1 |
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Formula: C18H23N Exact Mass: 253.183 Source ID: CNP0222283.0 |
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Formula: C18H21NO2 Exact Mass: 283.1572 Source ID: CNP0145476.1 |
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Formula: C18H23NO3 Exact Mass: 301.1678 Source ID: CNP0414551.1 |
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Formula: C36H57NO3 Exact Mass: 551.4338 Source ID: CNP0272828.2 |
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Formula: C18H25NO2 Exact Mass: 287.1885 Source ID: CNP0254284.1 |
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| 1H-Indole, 3,6-bis(3-methyl-2-butenyl)- Formula: C18H23N Exact Mass: 253.183 Source ID: CNP0312631.0 |
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Formula: C36H57NO4 Exact Mass: 567.4287 Source ID: CNP0347373.1 |
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| Xylopine Formula: C18H17NO3 Exact Mass: 295.1208 Source ID: CNP0388737.1 |
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Formula: C18H23NO2 Exact Mass: 285.1729 Source ID: CNP0228773.2 |
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| Asimilobine Formula: C17H17NO2 Exact Mass: 267.1259 Source ID: CNP0207620.2 |
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