Pathways Knowlegdes
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| Pathway | DOIs | Note |
|---|---|---|
| superpathway of central carbon metabolism Accession ID: BioCyc:LEISH_PWY3IU-99 |
|
Sernee MF, Ralton JE, Dinev Z, Khairallah GN, O’Hair RA, Williams SJ, McConville MJ. Leishmania ß-1,2-mannan is assembled on a mannose-cyclic phosphate primer. Proc. Natl. Acad. Sci. U.S.A. 2006 Jun 20;103(25):9458–63. doi: 10.1073/pnas.0603539103. |
| TCA cycle Accession ID: BioCyc:LEISH_TCA |
|
Leroux A, Fleming-Canepa X, Aranda A, Maugeri D, Cazzulo JJ, Sánchez MA, Nowicki C. Functional characterization and subcellular localization of the three malate dehydrogenase isozymes in Leishmania spp. Molecular and Biochemical Parasitology. 2006 Sep;149(1):74–85. doi: 10.1016/j.molbiopara.2006.04.010.; Louassini M, Foulquie M, Benitez R, Adroher J. Citric-Acid Cycle Key Enzyme Activities during In vitro Growth and Metacyclogenesis of Leishmania infantum Promastigotes. The Journal of Parasitology. 1999 Aug;85(4):595. doi: 10.2307/3285729. |
| methylmalonyl pathway Accession ID: BioCyc:LEISH_PROPIONMET-PWY |
- | |
| superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass Accession ID: BioCyc:TRYPANO_GLYCOLYSIS-TCA-GLYOX-BYPASS |
- | |
| aspartate superpathway Accession ID: BioCyc:TRYPANO_PWY0-781 |
- | |
| superpathway of glycolysis, pyruvate dehydrogenase and TCA cycle Accession ID: BioCyc:LEISH_PWY3IU-61 |
- | |
| TCA cycle Accession ID: BioCyc:TRYPANO_TCA |
- | |
| superpathway of lysine, threonine and methionine biosynthesis I Accession ID: BioCyc:TRYPANO_P4-PWY |
- | |
| phenylacetate degradation I (aerobic) Accession ID: BioCyc:TRYPANO_PWY0-321 |
- | |
| lysine biosynthesis I Accession ID: BioCyc:TRYPANO_DAPLYSINESYN-PWY |
- | |
| acetyl-CoA degradation to acetate Accession ID: BioCyc:LEISH_PWY3IU-16 |
|
Opperdoes FR, Coombs GH. Metabolism of Leishmania: proven and predicted. Trends Parasitol. 2007 Apr;23(4):149–58. doi: 10.1016/j.pt.2007.02.004. PMID: 17320480.; Van Hellemond JJ, Opperdoes FR, Tielens AGM. Trypanosomatidae produce acetate via a mitochondrial acetate:succinate CoA transferase. Proc. Natl. Acad. Sci. U.S.A. 1998 Mar 17;95(6):3036–41. doi: 10.1073/pnas.95.6.3036. |
| 3-oxoadipate degradation Accession ID: BioCyc:TRYPANO_PWY-2361 |
- | |
| benzoyl-CoA degradation I (aerobic) Accession ID: BioCyc:TRYPANO_PWY-1361 |
- | |
| pyruvate fermentation to propionate I Accession ID: BioCyc:TRYPANO_P108-PWY |
- | |
| superpathway of glyoxylate bypass and TCA Accession ID: BioCyc:TRYPANO_TCA-GLYOX-BYPASS |
- | |
| methionine biosynthesis I Accession ID: BioCyc:TRYPANO_HOMOSER-METSYN-PWY |
- | |
| Central carbon metabolism Accession ID: WikiPathways:WP3583 |
|
2011; 7 477 |
| TCA cycle (plant) Accession ID: Plant Reactome:R-OGU-1119533 |
|
Araújo WL, Nunes-Nesi A, Nikoloski Z, Sweetlove LJ, Fernie AR. Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues. Plant Cell Environ. 2012 Jan;35(1):1–21. doi: 10.1111/j.1365-3040.2011.02332.x. PMID: 21477125.; Millar AH, Whelan J, Soole KL, Day DA. Organization and regulation of mitochondrial respiration in plants. Annu Rev Plant Biol. 2011;62():79–104. doi: 10.1146/annurev-arplant-042110-103857. PMID: 21332361.; Tronconi MA, Gerrard Wheeler MC, Maurino VG, Drincovich MF, Andreo CS. NAD-malic enzymes of Arabidopsis thaliana display distinct kinetic mechanisms that support differences in physiological control. Biochem J. 2010 Sep 01;430(2):295–303. doi: 10.1042/bj20100497. PMID: 20528775.; Sweetlove LJ, Beard KF, Nunes-Nesi A, Fernie AR, Ratcliffe RG. Not just a circle: flux modes in the plant TCA cycle. Trends Plant Sci. 2010 Aug;15(8):462–70. doi: 10.1016/j.tplants.2010.05.006. PMID: 20554469.; Tronconi MA, Maurino VG, Andreo CS, Drincovich MF. Three Different and Tissue-specific NAD-Malic Enzymes Generated by Alternative Subunit Association in Arabidopsis thaliana. Journal of Biological Chemistry. 2010 Apr;285(16):11870–9. doi: 10.1074/jbc.m109.097477.; Grover SD, Canellas PF, Wedding RT. Purification of NAD malic enzyme from potato and investigation of some physical and kinetic properties. Archives of Biochemistry and Biophysics. 1981 Jul;209(2):396–407. doi: 10.1016/0003-9861(81)90297-6.; Day DA, Hanson JB. Pyruvate and malate transport and oxidation in corn mitochondria. Plant Physiol. 1977 Apr;59(4):630–5. PMID: 16659908; PMCID: PMC542463. |
| TCA cycle (plant) Accession ID: Plant Reactome:R-CCA-1119533 |
|
Araújo WL, Nunes-Nesi A, Nikoloski Z, Sweetlove LJ, Fernie AR. Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues. Plant Cell Environ. 2012 Jan;35(1):1–21. doi: 10.1111/j.1365-3040.2011.02332.x. PMID: 21477125.; Millar AH, Whelan J, Soole KL, Day DA. Organization and regulation of mitochondrial respiration in plants. Annu Rev Plant Biol. 2011;62():79–104. doi: 10.1146/annurev-arplant-042110-103857. PMID: 21332361.; Tronconi MA, Gerrard Wheeler MC, Maurino VG, Drincovich MF, Andreo CS. NAD-malic enzymes of Arabidopsis thaliana display distinct kinetic mechanisms that support differences in physiological control. Biochem J. 2010 Sep 01;430(2):295–303. doi: 10.1042/bj20100497. PMID: 20528775.; Sweetlove LJ, Beard KF, Nunes-Nesi A, Fernie AR, Ratcliffe RG. Not just a circle: flux modes in the plant TCA cycle. Trends Plant Sci. 2010 Aug;15(8):462–70. doi: 10.1016/j.tplants.2010.05.006. PMID: 20554469.; Tronconi MA, Maurino VG, Andreo CS, Drincovich MF. Three Different and Tissue-specific NAD-Malic Enzymes Generated by Alternative Subunit Association in Arabidopsis thaliana. Journal of Biological Chemistry. 2010 Apr;285(16):11870–9. doi: 10.1074/jbc.m109.097477.; Grover SD, Canellas PF, Wedding RT. Purification of NAD malic enzyme from potato and investigation of some physical and kinetic properties. Archives of Biochemistry and Biophysics. 1981 Jul;209(2):396–407. doi: 10.1016/0003-9861(81)90297-6.; Day DA, Hanson JB. Pyruvate and malate transport and oxidation in corn mitochondria. Plant Physiol. 1977 Apr;59(4):630–5. PMID: 16659908; PMCID: PMC542463. |
| TCA cycle (plant) Accession ID: Plant Reactome:R-JCU-1119533 |
|
Araújo WL, Nunes-Nesi A, Nikoloski Z, Sweetlove LJ, Fernie AR. Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues. Plant Cell Environ. 2012 Jan;35(1):1–21. doi: 10.1111/j.1365-3040.2011.02332.x. PMID: 21477125.; Millar AH, Whelan J, Soole KL, Day DA. Organization and regulation of mitochondrial respiration in plants. Annu Rev Plant Biol. 2011;62():79–104. doi: 10.1146/annurev-arplant-042110-103857. PMID: 21332361.; Tronconi MA, Gerrard Wheeler MC, Maurino VG, Drincovich MF, Andreo CS. NAD-malic enzymes of Arabidopsis thaliana display distinct kinetic mechanisms that support differences in physiological control. Biochem J. 2010 Sep 01;430(2):295–303. doi: 10.1042/bj20100497. PMID: 20528775.; Sweetlove LJ, Beard KF, Nunes-Nesi A, Fernie AR, Ratcliffe RG. Not just a circle: flux modes in the plant TCA cycle. Trends Plant Sci. 2010 Aug;15(8):462–70. doi: 10.1016/j.tplants.2010.05.006. PMID: 20554469.; Tronconi MA, Maurino VG, Andreo CS, Drincovich MF. Three Different and Tissue-specific NAD-Malic Enzymes Generated by Alternative Subunit Association in Arabidopsis thaliana. Journal of Biological Chemistry. 2010 Apr;285(16):11870–9. doi: 10.1074/jbc.m109.097477.; Grover SD, Canellas PF, Wedding RT. Purification of NAD malic enzyme from potato and investigation of some physical and kinetic properties. Archives of Biochemistry and Biophysics. 1981 Jul;209(2):396–407. doi: 10.1016/0003-9861(81)90297-6.; Day DA, Hanson JB. Pyruvate and malate transport and oxidation in corn mitochondria. Plant Physiol. 1977 Apr;59(4):630–5. PMID: 16659908; PMCID: PMC542463. |