Pathways Knowlegdes

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Pathway DOIs Note
adenosine nucleotides degradation II

Accession ID: BioCyc:META_SALVADEHYPOX-PWY
  • 10.1016/s0163-7258(00)00097-8
  • 10.1016/s0944-5013(11)80008-x
 Bzowska A, Kulikowska E, Shugar D. Purine nucleoside phosphorylases: properties, functions, and clinical aspects. Pharmacol Ther. 2000 Dec;88(3):349–425. doi: 10.1016/s0163-7258(00)00097-8. PMID: 11337031.; Elshafei AM, Abu-Shady MR, el-Beih FM, Mohamed LA. Mode and extent of degradation of adenosine and guanosine by extracts of Aspergillus terricola. Microbiol Res. 1995 Sep;150(3):291–5. doi: 10.1016/s0944-5013(11)80008-x. PMID: 7551735.
purine nucleotides degradation I (plants)

Accession ID: BioCyc:META_PWY-5044
  • 10.1074/jbc.m312929200
  • 10.1104/pp.115.4.1307
 Hesberg C, Hänsch R, Mendel RR, Bittner F. Tandem orientation of duplicated xanthine dehydrogenase genes from Arabidopsis thaliana: differential gene expression and enzyme activities. J Biol Chem. 2004 Apr 02;279(14):13547–54. doi: 10.1074/jbc.m312929200. PMID: 14726515.; Capote-Maínez N, Sánchez F. Characterization of the common bean uricase II and its expression in organs other than nodules. Plant Physiol. 1997 Dec;115(4):1307–17. PMID: 9414545; PMCID: PMC158596.
superpathway of purine nucleotide salvage

Accession ID: BioCyc:META_PWY66-409
  • 10.1016/s0021-9258(19)83606-2
  • 10.1016/s0163-7258(00)00097-8
  • 10.1073/pnas.93.3.1232
 Bzowska A, Kulikowska E, Shugar D. Purine nucleoside phosphorylases: properties, functions, and clinical aspects. Pharmacol Ther. 2000 Dec;88(3):349–425. doi: 10.1016/s0163-7258(00)00097-8. PMID: 11337031.; Spychala J, Datta NS, Takabayashi K, Datta M, Fox IH, Gribbin T, Mitchell BS. Cloning of human adenosine kinase cDNA: sequence similarity to microbial ribokinases and fructokinases. Proc. Natl. Acad. Sci. U.S.A. 1996 Feb 06;93(3):1232–7. doi: 10.1073/pnas.93.3.1232.; Lewis AS, Lowy BA. Human erythrocyte purine nucleoside phosphorylase: molecular weight and physical properties. A Theorell-Chance catalytic mechanism. Journal of Biological Chemistry. 1979 Oct;254(19):9927–32. doi: 10.1016/s0021-9258(19)83606-2.
adenine and adenosine salvage III

Accession ID: BioCyc:META_PWY-6609
  • 10.1016/s0163-7258(00)00097-8
  • 10.1016/s0944-5013(11)80008-x
 Bzowska A, Kulikowska E, Shugar D. Purine nucleoside phosphorylases: properties, functions, and clinical aspects. Pharmacol Ther. 2000 Dec;88(3):349–425. doi: 10.1016/s0163-7258(00)00097-8. PMID: 11337031.; Elshafei AM, Abu-Shady MR, el-Beih FM, Mohamed LA. Mode and extent of degradation of adenosine and guanosine by extracts of Aspergillus terricola. Microbiol Res. 1995 Sep;150(3):291–5. doi: 10.1016/s0944-5013(11)80008-x. PMID: 7551735.
S-adenosyl-L-methionine cycle II

Accession ID: BioCyc:META_PWY-5041
  • 10.1016/s0014-5793(01)02512-1
 Koshiishi C, Kato A, Yama S, Crozier A, Ashihara H. A new caffeine biosynthetic pathway in tea leaves: utilisation of adenosine released from the S-adenosyl-L-methionine cycle. FEBS Letters. 2001 Jun 14;499(1-2):50–4. doi: 10.1016/s0014-5793(01)02512-1.
purine ribonucleosides degradation

Accession ID: BioCyc:SHIGELLA_PWY0-1296		 -
adenosine nucleotides degradation II

Accession ID: BioCyc:ECOO157_SALVADEHYPOX-PWY		 -
purine ribonucleosides degradation

Accession ID: BioCyc:ECOO157_PWY0-1296		 -
adenine and adenosine salvage III

Accession ID: BioCyc:ECOO157_PWY-6609		 -
adenosine nucleotides degradation II

Accession ID: BioCyc:CAULO_SALVADEHYPOX-PWY		 -
adenosine nucleotides degradation II

Accession ID: BioCyc:AGRO_SALVADEHYPOX-PWY		 -
purine nucleotides degradation II (aerobic)

Accession ID: BioCyc:AURANTIMONAS_PWY-6353		 -
purine ribonucleosides degradation to ribose-1-phosphate

Accession ID: BioCyc:MOUSE_PWY0-1296		 -
adenosine nucleotides degradation I

Accession ID: BioCyc:SCO_PWY-6596
  • 10.1016/s1476-9271(02)00094-4
  • 10.1093/nar/28.1.27
 Gattiker A, Michoud K, Rivoire C, Auchincloss AH, Coudert E, Lima T, Kersey P, Pagni M, Sigrist CJA, Lachaize C, Veuthey A, Gasteiger E, Bairoch A. Automated annotation of microbial proteomes in SWISS-PROT. Computational Biology and Chemistry. 2003 Feb;27(1):49–58. doi: 10.1016/s1476-9271(02)00094-4.; Kanehisa M, Goto S. KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 2000 Jan 01;28(1):27–30. PMID: 10592173; PMCID: PMC102409.
purine ribonucleosides degradation

Accession ID: BioCyc:BSUB_PWY0-1296		 -
adenine and adenosine salvage V

Accession ID: BioCyc:ECOL316407_PWY-6611		 -
adenine and adenosine salvage V

Accession ID: BioCyc:ECOL413997_PWY-6611		 -
adenosine nucleotides degradation II

Accession ID: BioCyc:PDIF272563_SALVADEHYPOX-PWY		 -
purine nucleotides degradation II (aerobic)

Accession ID: BioCyc:PDIF272563_PWY-6353		 -
superpathway of purine nucleotide salvage

Accession ID: BioCyc:HUMAN_PWY66-409
  • 10.1016/s0021-9258(19)83606-2
  • 10.1073/pnas.93.3.1232
 Spychala J, Datta NS, Takabayashi K, Datta M, Fox IH, Gribbin T, Mitchell BS. Cloning of human adenosine kinase cDNA: sequence similarity to microbial ribokinases and fructokinases. Proc. Natl. Acad. Sci. U.S.A. 1996 Feb 06;93(3):1232–7. doi: 10.1073/pnas.93.3.1232.; Lewis AS, Lowy BA. Human erythrocyte purine nucleoside phosphorylase: molecular weight and physical properties. A Theorell-Chance catalytic mechanism. Journal of Biological Chemistry. 1979 Oct;254(19):9927–32. doi: 10.1016/s0021-9258(19)83606-2.