Pathways Knowlegdes

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Pathway DOIs Note
β-caryophyllene biosynthesis

Accession ID: BioCyc:META_PWY-6275
  • 10.1073/pnas.0803601105
  • 10.1105/tpc.007989
  • 10.1111/j.1365-313x.2005.02417.x
 Gertsch J, Leonti M, Raduner S, Racz I, Chen JZ, Xie XQ, Altmann KH, Karsak M, Zimmer A. Beta-caryophyllene is a dietary cannabinoid. Proc Natl Acad Sci U S A. 2008 Jul 01;105(26):9099–104. PMID: 18574142; PMCID: PMC2449371.; Tholl D, Chen F, Petri J, Gershenzon J, Pichersky E. Two sesquiterpene synthases are responsible for the complex mixture of sesquiterpenes emitted from Arabidopsis flowers. Plant J. 2005 Jun;42(5):757–71. doi: 10.1111/j.1365-313x.2005.02417.x. PMID: 15918888.; Chen F, Tholl D, D'Auria JC, Farooq A, Pichersky E, Gershenzon J. Biosynthesis and emission of terpenoid volatiles from Arabidopsis flowers. Plant Cell. 2003 Feb;15(2):481–94. PMID: 12566586; PMCID: PMC141215.
β-caryophyllene biosynthesis

Accession ID: BioCyc:ARA_PWY-6275
  • 10.1016/j.abb.2005.09.019
  • 10.1073/pnas.0803601105
  • 10.1105/tpc.007989
  • 10.1111/j.1365-313x.2005.02417.x
 Gertsch J, Leonti M, Raduner S, Racz I, Chen JZ, Xie XQ, Altmann KH, Karsak M, Zimmer A. Beta-caryophyllene is a dietary cannabinoid. Proc Natl Acad Sci U S A. 2008 Jul 01;105(26):9099–104. PMID: 18574142; PMCID: PMC2449371.; Ro DK, Ehlting J, Keeling CI, Lin R, Mattheus N, Bohlmann J. Microarray expression profiling and functional characterization of AtTPS genes: duplicated Arabidopsis thaliana sesquiterpene synthase genes At4g13280 and At4g13300 encode root-specific and wound-inducible (Z)-gamma-bisabolene synthases. Arch Biochem Biophys. 2006 Apr 15;448(1-2):104–16. doi: 10.1016/j.abb.2005.09.019. PMID: 16297850.; Tholl D, Chen F, Petri J, Gershenzon J, Pichersky E. Two sesquiterpene synthases are responsible for the complex mixture of sesquiterpenes emitted from Arabidopsis flowers. Plant J. 2005 Jun;42(5):757–71. doi: 10.1111/j.1365-313x.2005.02417.x. PMID: 15918888.; Chen F, Tholl D, D'Auria JC, Farooq A, Pichersky E, Gershenzon J. Biosynthesis and emission of terpenoid volatiles from Arabidopsis flowers. Plant Cell. 2003 Feb;15(2):481–94. PMID: 12566586; PMCID: PMC141215.
zerumbone biosynthesis

Accession ID: BioCyc:META_PWY-6265
  • 10.1007/s00425-008-0700-x
 Yu F, Okamto S, Nakasone K, Adachi K, Matsuda S, Harada H, Misawa N, Utsumi R. Molecular cloning and functional characterization of alpha-humulene synthase, a possible key enzyme of zerumbone biosynthesis in shampoo ginger (Zingiber zerumbet Smith). Planta. 2008 May;227(6):1291–9. doi: 10.1007/s00425-008-0700-x. PMID: 18273640.
β-caryophyllene biosynthesis

Accession ID: PlantCyc:SPENNELLII_PWY-6275		 -
β-caryophyllene biosynthesis

Accession ID: PlantCyc:TPARVULA_PWY-6275		 -
β-caryophyllene biosynthesis

Accession ID: PlantCyc:WHEATD_PWY-6275		 -
β-caryophyllene biosynthesis

Accession ID: PlantCyc:BOLERACEA_OLERACEA_PWY-6275		 -
β-caryophyllene biosynthesis

Accession ID: PlantCyc:BREADWHEAT_PWY-6275		 -
β-caryophyllene biosynthesis

Accession ID: PlantCyc:RUBBERTREE_PWY-6275		 -
β-caryophyllene biosynthesis

Accession ID: PlantCyc:CORN_PWY-6275
  • 10.1016/j.abb.2005.09.019
  • 10.1105/tpc.007989
  • 10.1105/tpc.107.051672
  • 10.1111/j.1365-313x.2005.02417.x
 Köllner TG, Held M, Lenk C, Hiltpold I, Turlings TC, Gershenzon J, Degenhardt J. A maize (E)-beta-caryophyllene synthase implicated in indirect defense responses against herbivores is not expressed in most American maize varieties. Plant Cell. 2008 Feb;20(2):482–94. PMID: 18296628; PMCID: PMC2276456.; Ro DK, Ehlting J, Keeling CI, Lin R, Mattheus N, Bohlmann J. Microarray expression profiling and functional characterization of AtTPS genes: duplicated Arabidopsis thaliana sesquiterpene synthase genes At4g13280 and At4g13300 encode root-specific and wound-inducible (Z)-gamma-bisabolene synthases. Arch Biochem Biophys. 2006 Apr 15;448(1-2):104–16. doi: 10.1016/j.abb.2005.09.019. PMID: 16297850.; Tholl D, Chen F, Petri J, Gershenzon J, Pichersky E. Two sesquiterpene synthases are responsible for the complex mixture of sesquiterpenes emitted from Arabidopsis flowers. Plant J. 2005 Jun;42(5):757–71. doi: 10.1111/j.1365-313x.2005.02417.x. PMID: 15918888.; Chen F, Tholl D, D'Auria JC, Farooq A, Pichersky E, Gershenzon J. Biosynthesis and emission of terpenoid volatiles from Arabidopsis flowers. Plant Cell. 2003 Feb;15(2):481–94. PMID: 12566586; PMCID: PMC141215.
β-caryophyllene biosynthesis

Accession ID: PlantCyc:CUCUMBER_PWY-6275
  • 10.1016/j.abb.2005.09.019
  • 10.1073/pnas.0803601105
  • 10.1105/tpc.007989
  • 10.1105/tpc.107.051672
  • 10.1111/j.1365-313x.2005.02417.x
 Gertsch J, Leonti M, Raduner S, Racz I, Chen JZ, Xie XQ, Altmann KH, Karsak M, Zimmer A. Beta-caryophyllene is a dietary cannabinoid. Proc Natl Acad Sci U S A. 2008 Jul 01;105(26):9099–104. PMID: 18574142; PMCID: PMC2449371.; Köllner TG, Held M, Lenk C, Hiltpold I, Turlings TC, Gershenzon J, Degenhardt J. A maize (E)-beta-caryophyllene synthase implicated in indirect defense responses against herbivores is not expressed in most American maize varieties. Plant Cell. 2008 Feb;20(2):482–94. PMID: 18296628; PMCID: PMC2276456.; Ro DK, Ehlting J, Keeling CI, Lin R, Mattheus N, Bohlmann J. Microarray expression profiling and functional characterization of AtTPS genes: duplicated Arabidopsis thaliana sesquiterpene synthase genes At4g13280 and At4g13300 encode root-specific and wound-inducible (Z)-gamma-bisabolene synthases. Arch Biochem Biophys. 2006 Apr 15;448(1-2):104–16. doi: 10.1016/j.abb.2005.09.019. PMID: 16297850.; Tholl D, Chen F, Petri J, Gershenzon J, Pichersky E. Two sesquiterpene synthases are responsible for the complex mixture of sesquiterpenes emitted from Arabidopsis flowers. Plant J. 2005 Jun;42(5):757–71. doi: 10.1111/j.1365-313x.2005.02417.x. PMID: 15918888.; Chen F, Tholl D, D'Auria JC, Farooq A, Pichersky E, Gershenzon J. Biosynthesis and emission of terpenoid volatiles from Arabidopsis flowers. Plant Cell. 2003 Feb;15(2):481–94. PMID: 12566586; PMCID: PMC141215.
β-caryophyllene biosynthesis

Accession ID: PlantCyc:OBARTHII_PWY-6275		 -
β-caryophyllene biosynthesis

Accession ID: PlantCyc:ONIVARA_PWY-6275		 -
β-caryophyllene biosynthesis

Accession ID: PlantCyc:PAXILLARIS_PWY-6275		 -
β-caryophyllene biosynthesis

Accession ID: PlantCyc:LPERRIERI_PWY-6275		 -
β-caryophyllene biosynthesis

Accession ID: PlantCyc:EGGPLANT_PWY-6275		 -
β-caryophyllene biosynthesis

Accession ID: PlantCyc:CASTORBEAN_PWY-6275		 -
β-caryophyllene biosynthesis

Accession ID: PlantCyc:WATERMELON_PWY-6275		 -
β-caryophyllene biosynthesis

Accession ID: PlantCyc:ORYZA_PWY-6275
  • 10.1073/pnas.0803601105
  • 10.1105/tpc.007989
  • 10.1111/j.1365-313x.2005.02417.x
 Gertsch J, Leonti M, Raduner S, Racz I, Chen JZ, Xie XQ, Altmann KH, Karsak M, Zimmer A. Beta-caryophyllene is a dietary cannabinoid. Proc Natl Acad Sci U S A. 2008 Jul 01;105(26):9099–104. PMID: 18574142; PMCID: PMC2449371.; Tholl D, Chen F, Petri J, Gershenzon J, Pichersky E. Two sesquiterpene synthases are responsible for the complex mixture of sesquiterpenes emitted from Arabidopsis flowers. Plant J. 2005 Jun;42(5):757–71. doi: 10.1111/j.1365-313x.2005.02417.x. PMID: 15918888.; Chen F, Tholl D, D'Auria JC, Farooq A, Pichersky E, Gershenzon J. Biosynthesis and emission of terpenoid volatiles from Arabidopsis flowers. Plant Cell. 2003 Feb;15(2):481–94. PMID: 12566586; PMCID: PMC141215.
β-caryophyllene biosynthesis

Accession ID: PlantCyc:OTHOMAEUM_PWY-6275		 -