Pathways Knowlegdes
Necessitatibus eius consequatur ex aliquid fuga eum quidem sint consectetur velit
| Pathway | DOIs | Note |
|---|---|---|
| glucose and glucose-1-phosphate degradation Accession ID: BioCyc:AURANTIMONAS_GLUCOSE1PMETAB-PWY |
- | |
| glucose and glucose-1-phosphate degradation Accession ID: BioCyc:MOUSE_GLUCOSE1PMETAB-PWY |
- | |
| glucose and glucose-1-phosphate degradation Accession ID: BioCyc:SMAN_GLUCOSE1PMETAB-PWY |
- | |
| glucose and glucose-1-phosphate degradation Accession ID: BioCyc:SCO_GLUCOSE1PMETAB-PWY |
- | |
| glucose and glucose-1-phosphate degradation Accession ID: BioCyc:FLY_GLUCOSE1PMETAB-PWY |
- | |
| Entner-Doudoroff pathway III (semi-phosphorylative) Accession ID: BioCyc:THAPS_PWY-2221 |
- | |
| cichoriin interconversion Accession ID: BioCyc:META_PWY-7057 |
|
Bayoumi SA, Rowan MG, Beeching JR, Blagbrough IS. Investigation of biosynthetic pathways to hydroxycoumarins during post-harvest physiological deterioration in Cassava roots by using stable isotope labelling. Chembiochem. 2008 Dec 15;9(18):3013–22. doi: 10.1002/cbic.200800515. PMID: 19035613.; Taguchi, Imura, Maeda, Kodaira, Hayashida, Shimosaka, Okazaki. Purification and characterization of UDP-glucose: hydroxycoumarin 7-O-glucosyltransferase, with broad substrate specificity from tobacco cultured cells. Plant Sci. 2000 Aug 08;157(1):105–12. doi: 10.1016/s0168-9452(00)00270-3. PMID: 10940474.; HARBORNE JB. Plant polyphenols. 2. The coumarins of Solanum pinnatisectum. Biochem J. 1960 Feb;74():270–3. PMID: 14399695; PMCID: PMC1204153. |
| daphnetin modification Accession ID: BioCyc:META_PWY-7055 |
|
Griesser M, Vitzthum F, Fink B, Bellido ML, Raasch C, Munoz-Blanco J, Schwab W. Multi-substrate flavonol O-glucosyltransferases from strawberry (Fragaria x ananassa) achene and receptacle. J Exp Bot. 2008;59(10):2611–25. PMID: 18487633; PMCID: PMC2486459.; NDong C, Anzellotti D, Ibrahim RK, Huner NPA, Sarhan F. Daphnetin Methylation by a Novel O-Methyltransferase Is Associated with Cold Acclimation and Photosystem II Excitation Pressure in Rye. Journal of Biological Chemistry. 2003 Feb;278(9):6854–61. doi: 10.1074/jbc.m209439200.; Yang EB, Zhao YN, Zhang K, Mack P. Daphnetin, One of Coumarin Derivatives, Is a Protein Kinase Inhibitor. Biochemical and Biophysical Research Communications. 1999 Jul;260(3):682–5. doi: 10.1006/bbrc.1999.0958. |
| vicianin bioactivation Accession ID: BioCyc:META_PWY-7093 |
|
Mithöfer A, Boland W. Plant defense against herbivores: chemical aspects. Annu Rev Plant Biol. 2012;63():431–50. doi: 10.1146/annurev-arplant-042110-103854. PMID: 22404468.; Nielsen KA, Tattersall DB, Jones PR, Møller BL. Metabolon formation in dhurrin biosynthesis. Phytochemistry. 2008 Jan;69(1):88–98. doi: 10.1016/j.phytochem.2007.06.033. PMID: 17706731.; Ahn YO, Saino H, Mizutani M, Shimizu B, Sakata K. Vicianin hydrolase is a novel cyanogenic beta-glycosidase specific to beta-vicianoside (6-O-alpha-L-arabinopyranosyl-beta-D-glucopyranoside) in seeds of Vicia angustifolia. Plant Cell Physiol. 2007 Jul;48(7):938–47. doi: 10.1093/pcp/pcm065. PMID: 17548373.; Ahn YO, Mizutani M, Saino H, Sakata K. Furcatin Hydrolase from Viburnum furcatum Blume Is a Novel Disaccharide-specific Acuminosidase in Glycosyl Hydrolase Family 1. Journal of Biological Chemistry. 2004 May;279(22):23405–14. doi: 10.1074/jbc.m311379200.; Mizutani M, Nakanishi H, Ema J, Ma SJ, Noguchi E, Inohara-Ochiai M, Fukuchi-Mizutani M, Nakao M, Sakata K. Cloning of beta-primeverosidase from tea leaves, a key enzyme in tea aroma formation. Plant Physiol. 2002 Dec;130(4):2164–76. PMID: 12481100; PMCID: PMC166728.; Jones DA. Why are so many food plants cyanogenic? Phytochemistry. 1998 Jan;47(2):155–62. doi: 10.1016/s0031-9422(97)00425-1. PMID: 9431670.; Wajant H, Forster S, Selmar D, Effenberger F, Pfizenmaier K. Purification and Characterization of a Novel (R)-Mandelonitrile Lyase from the Fern Phlebodium aureum. Plant Physiol. 1995 Dec;109(4):1231–8. PMID: 12228664; PMCID: PMC157655.; Poulton JE. Cyanogenesis in plants. Plant Physiol. 1990 Oct;94(2):401–5. PMID: 16667728; PMCID: PMC1077245.; Lizotte PA, Poulton JE. Catabolism of Cyanogenic Glycosides by Purified Vicianin Hydrolase from Squirrel's Foot Fern (Davallia Trichomanoides Blume). Plant Physiol. 1988 Feb 01;86(2):322–4. doi: 10.1104/pp.86.2.322. |
| glucose degradation (oxidative) Accession ID: BioCyc:META_DHGLUCONATE-PYR-CAT-PWY |
|
Basu A, Phale PS. Inducible uptake and metabolism of glucose by the phosphorylative pathway in Pseudomonas putida CSV86. FEMS Microbiol Lett. 2006 Jun;259(2):311–6. doi: 10.1111/j.1574-6968.2006.00285.x. PMID: 16734795.; Fuhrer T, Fischer E, Sauer U. Experimental Identification and Quantification of Glucose Metabolism in Seven Bacterial Species. J Bacteriol. 2005 Mar;187(5):1581–90. doi: 10.1128/jb.187.5.1581-1590.2005.; Swanson BL, Hager P, Phibbs P, Ochsner U, Vasil ML, Hamood AN. Characterization of the 2-ketogluconate utilization operon in Pseudomonas aeruginosa PAO1. Molecular Microbiology. 2000 Aug;37(3):561–73. doi: 10.1046/j.1365-2958.2000.02012.x.; FRAMPTON EW, WOOD WA. Carbohydrate oxidation by Pseudomonas fluorescens VI. Conversion of 2-keto-6-phosphogluconate to pyruvate. J Biol Chem. 1961 Oct;236():2571–7. PMID: 13894458. |
| glucose and glucose-1-phosphate degradation Accession ID: BioCyc:META_GLUCOSE1PMETAB-PWY |
- | |
| Entner-Doudoroff pathway III (semi-phosphorylative) Accession ID: BioCyc:TRYPANO_PWY-2221 |
- | |
| glucose degradation (oxidative) Accession ID: BioCyc:AGRO_DHGLUCONATE-PYR-CAT-PWY |
- | |
| sorbitol biosynthesis II Accession ID: BioCyc:AURANTIMONAS_PWY-5530 |
- | |
| glucose and glucose-1-phosphate degradation Accession ID: BioCyc:PCHR_GLUCOSE1PMETAB-PWY |
- | |
| glucose and glucose-1-phosphate degradation Accession ID: BioCyc:CLOSSAC_GLUCOSE1PMETAB-PWY |
- | |
| linamarin degradation Accession ID: BioCyc:META_PWY-3121 |
|
Zagrobelny M, Bak S, Rasmussen AV, Jørgensen B, Naumann CM, Lindberg Møller B. Cyanogenic glucosides and plant-insect interactions. Phytochemistry. 2004 Feb;65(3):293–306. doi: 10.1016/j.phytochem.2003.10.016. PMID: 14751300.; Vetter J. Plant cyanogenic glycosides. Toxicon. 2000 Jan;38(1):11–36. doi: 10.1016/s0041-0101(99)00128-2. PMID: 10669009.; White, Arias-Garzon, McMahon, Sayre. Cyanogenesis in cassava. The role of hydroxynitrile lyase in root cyanide production . Plant Physiol. 1998 Apr;116(4):1219–25. PMID: 9536038; PMCID: PMC35028.; Eksittikul T, Chulavatnatol M. Characterization of cyanogenic ß-glucosidase (Linamarase) from cassava (Manihot esculenta Crantz). Archives of Biochemistry and Biophysics. 1988 Oct;266(1):263–9. doi: 10.1016/0003-9861(88)90257-3. |
| neolinustatin bioactivation Accession ID: BioCyc:META_PWY-7092 |
|
Mithöfer A, Boland W. Plant defense against herbivores: chemical aspects. Annu Rev Plant Biol. 2012;63():431–50. doi: 10.1146/annurev-arplant-042110-103854. PMID: 22404468.; Jones DA. Why are so many food plants cyanogenic? Phytochemistry. 1998 Jan;47(2):155–62. doi: 10.1016/s0031-9422(97)00425-1. PMID: 9431670.; Selmar D, Lieberei R, Biehl B. Mobilization and utilization of cyanogenic glycosides: the linustatin pathway. Plant Physiol. 1988 Mar;86(3):711–6. PMID: 16665975; PMCID: PMC1054557.; Selmar D, Lieberei R, Biehl B, Voigt J. Hevea Linamarase-A Nonspecific beta-Glycosidase. Plant Physiol. 1987 Mar;83(3):557–63. PMID: 16665288; PMCID: PMC1056404.; Fan TW-, Conn EE. Isolation and characterization of two cyanogenic ß-glucosidases from flax seeds. Archives of Biochemistry and Biophysics. 1985 Dec;243(2):361–73. doi: 10.1016/0003-9861(85)90513-2. |
| Entner-Doudoroff pathway III (semi-phosphorylative) Accession ID: BioCyc:META_PWY-2221 |
|
Siebers B, Schönheit P. Unusual pathways and enzymes of central carbohydrate metabolism in Archaea. Curr Opin Microbiol. 2005 Dec;8(6):695–705. doi: 10.1016/j.mib.2005.10.014. PMID: 16256419.; Tomlinson GA, Koch TK, Hochstein LI. The metabolism of carbohydrates by extremely halophilic bacteria: glucose metabolism via a modified Entner-Doudoroff pathway. Can. J. Microbiol. 1974 Aug 01;20(8):1085–91. doi: 10.1139/m74-170. |
| glucose and glucose-1-phosphate degradation Accession ID: BioCyc:PLASMO_GLUCOSE1PMETAB-PWY |
- |