Pathways Knowlegdes

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Pathway DOIs Note
superpathway of central carbon metabolism

Accession ID: BioCyc:LEISH_PWY3IU-99
  • 10.1073/pnas.0603539103
 Sernee MF, Ralton JE, Dinev Z, Khairallah GN, O’Hair RA, Williams SJ, McConville MJ. Leishmania ß-1,2-mannan is assembled on a mannose-cyclic phosphate primer. Proc. Natl. Acad. Sci. U.S.A. 2006 Jun 20;103(25):9458–63. doi: 10.1073/pnas.0603539103.
glycolysis I

Accession ID: BioCyc:LEISH_GLYCOLYSIS
  • 10.1016/j.bbamcr.2006.08.019
 Michels PAM, Bringaud F, Herman M, Hannaert V. Metabolic functions of glycosomes in trypanosomatids. Biochimica et Biophysica Acta (BBA) - Molecular Cell Research. 2006 Dec;1763(12):1463–77. doi: 10.1016/j.bbamcr.2006.08.019.
gluconeogenesis I

Accession ID: BioCyc:LEISH_GLUCONEO-PWY
  • 10.1073/pnas.0509196103
  • 10.1074/jbc.m603265200
 Rodríguez-Contreras D, Landfear SM. Metabolic Changes in Glucose Transporter-deficient Leishmania mexicana and Parasite Virulence. Journal of Biological Chemistry. 2006 Jul;281(29):20068–76. doi: 10.1074/jbc.m603265200.; Naderer T, Ellis MA, Sernee MF, De Souza DP, Curtis J, Handman E, McConville MJ. Virulence of Leishmania major in macrophages and mice requires the gluconeogenic enzyme fructose-1,6-bisphosphatase. Proc. Natl. Acad. Sci. U.S.A. 2006 Apr 04;103(14):5502–7. doi: 10.1073/pnas.0509196103.
sucrose degradation to ethanol and lactate (anaerobic)

Accession ID: BioCyc:TRYPANO_PWY-3801		 -
superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass

Accession ID: BioCyc:TRYPANO_GLYCOLYSIS-TCA-GLYOX-BYPASS		 -
superpathway of glycolysis, pyruvate dehydrogenase and TCA cycle

Accession ID: BioCyc:LEISH_PWY3IU-61		 -
superpathway of glycolysis and Entner-Doudoroff

Accession ID: BioCyc:TRYPANO_GLYCOLYSIS-E-D		 -
glycolysis II

Accession ID: BioCyc:TRYPANO_PWY-5484		 -
heterolactic fermentation

Accession ID: BioCyc:TRYPANO_P122-PWY		 -
gluconeogenesis I

Accession ID: BioCyc:TRYPANO_GLUCONEO-PWY		 -
gluconeogenesis

Accession ID: BioCyc:CALBI_GLUCONEO-PWY
  • 10.1099/00221287-144-1-13
 Klein CJL, Olsson L, Nielsen J. Glucose control in Saccharomyces cerevisiae: the role of Mig1 in metabolic functions. Microbiology (Reading). 1998 Jan;144 ( Pt 1)():13–24. doi: 10.1099/00221287-144-1-13. PMID: 9467897.
serine biosynthesis

Accession ID: BioCyc:LEISH_SERSYN-PWY
  • 10.1016/j.pt.2007.02.004
 Opperdoes FR, Coombs GH. Metabolism of Leishmania: proven and predicted. Trends Parasitol. 2007 Apr;23(4):149–58. doi: 10.1016/j.pt.2007.02.004. PMID: 17320480.
formaldehyde assimilation I (serine pathway)

Accession ID: BioCyc:TRYPANO_PWY-1622		 -
Bifidobacterium shunt

Accession ID: BioCyc:TRYPANO_P124-PWY		 -
Entner-Doudoroff pathway III (semi-phosphorylative)

Accession ID: BioCyc:TRYPANO_PWY-2221		 -
glycolysis I

Accession ID: BioCyc:TRYPANO_GLYCOLYSIS		 -
serine biosynthesis

Accession ID: BioCyc:CALBI_SERSYN-PWY
  • 10.1074/jbc.m211692200
 Albers E, Laizé V, Blomberg A, Hohmann S, Gustafsson L. Ser3p (Yer081wp) and Ser33p (Yil074cp) Are Phosphoglycerate Dehydrogenases in Saccharomyces cerevisiae. Journal of Biological Chemistry. 2003 Mar;278(12):10264–72. doi: 10.1074/jbc.m211692200.
superpathway of serine and glycine biosynthesis I

Accession ID: BioCyc:LEISH_SER-GLYSYN-PWY		 -
formaldehyde assimilation III (dihydroxyacetone cycle)

Accession ID: BioCyc:TRYPANO_P185-PWY		 -
glycolysis III

Accession ID: BioCyc:TRYPANO_ANAGLYCOLYSIS-PWY		 -