Geranyl diphosphate (BioCAD00000011531)

plant natural products microbial natural products

Metabolite Card

Formula: C10H20O7P2 (314.0684)
SMILES: O(P(=O)(O)OP(O)(=O)O)C/C=C(\C)/CC/C=C(\C)/C

Synonyms [en]

Geranyl diphosphate; geranyl pyrophosphate; [(2E)-3,7-dimethylocta-2,6-dienyl] phosphono hydrogen phosphate; (2E)-3,7-dimethylocta-2,6-dien-1-yl trihydrogen diphosphate; GPP; Geranyl pyrophosphate ammonium salt, 1 mg/mL in methanol (:aqueous 10 mM NH4OH (7:3)), >=95% (TLC)

Reviewed

Last reviewed on 2024-06-28.

Cite this Page

Geranyl diphosphate. 数据之源，洞见之始. SMRUCC genomics institute, a synthetic life researcher from China. https://biocad_registry.innovation.ac.cn/s/(-)-arctiin (retrieved 2026-01-03) (CAD Registry RN: BioCAD00000011531). Licensed under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).

Note

Geranyl diphosphate

Entity Information

DBLinks

Other DBLinks
  • CAS Registry Number: 763-10-0
  • PubChem: 445995
  • ChEBI: ChEBI:17211
  • HMDB: HMDB0001285
  • HMDB: HMDB01285
  • LipidMaps: LMPR0102010001
  • KEGG: C00341
  • NCBI MeSH: geranyl diphosphate
  • Wikipedia: Geranyl_pyrophosphate
  • DrugBank: DB02552
  • RefMet: RM0158253
  • MoNA: CCMSLIB00000578083
  • Metlin: METLIN_400
  • Coconut NaturalProduct: CNP0343392.1
  • Coconut NaturalProduct: CNP0343392.2

Class / Ontology

Metabolic Network
ID EC Number Name
KEGG:R01658 2.5.1.1 dimethylallyl-diphosphate:isopentenyl-diphosphate dimethylallyltranstransferase
KEGG:R02003 2.5.1.10 geranyl-diphosphate:isopentenyl-diphosphate geranyltrans-transferase
KEGG:R02004 4.2.3.10 geranyl-diphosphate diphosphate-lyase [cyclizing, (-)-endo-fenchol-forming]
KEGG:R02006 4.2.3.11 geranyl-diphosphate diphosphate-lyase (cyclizing, sabinene-hydrate-forming)
KEGG:R02007 5.5.1.8 (+)-bornyl-diphosphate lyase (decyclizing)
KEGG:R02009 4.2.3.15 geranyldiphosphate diphosphate-lyase (myrcene-forming)
KEGG:R02010 4.2.3.113 geranyl-diphosphate diphosphate-lyase (cyclizing, terpinolene-forming)
KEGG:R02011 4.2.3.- geranyl-diphosphate diphosphate-lyase (cyclizing, comphene-forming)
KEGG:R02013 4.2.3.16 geranyl-diphosphate diphosphate-lyase [cyclizing; (4S)-limonene-forming]
KEGG:R05765 4.2.3.119 geranyl-diphosphate diphosphate-lyase [cyclizing, (-)-alpha-pinene-forming]
KEGG:R05766 4.2.3.120 geranyl-diphosphate diphosphate-lyase [cyclizing, (-)-beta-pinene-forming]
KEGG:R06120 4.2.3.20 geranyldiphosphate diphosphate lyase [(+)-(R)-limonene-forming]
KEGG:R06421 4.2.3.108 geranyl-diphosphate diphosphate-lyase [cyclizing, (-)-alpha-terpineol-forming]
KEGG:R07631 4.2.3.25 geranyl-diphosphate diphosphate-lyase [(3S)-linalool-forming]
KEGG:R07632 4.2.3.26 geranyl-diphosphate diphosphate-lyase [(3R)-linalool-forming]
KEGG:R08393 C00341<=>C09871
KEGG:R08394 C00341<=>C09847
KEGG:R08395 C00341<=>C09839 + C00013
KEGG:R08396 3.1.7.3 geranyl-diphosphate diphosphohydrolase
KEGG:R08397 C00341<=>C09849
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Organism Source

Taxonomy Source

  1. Arabidopsis thaliana [ncbi taxid: 3702]
  2. Citrofortunella mitis [ncbi taxid: ]
  3. Citrus unshiu [ncbi taxid: 55188]
  4. Erwinia herbicola strain Eho10 [ncbi taxid: ]
  5. Erwinia herbicola strain Eho13 [ncbi taxid: ]
  6. Erwinia uredovora [ncbi taxid: ]
  7. Flavobacterium sp. Strain R1534 [ncbi taxid: ]
  8. Lithospermum erythrorhizon [ncbi taxid: 34254]
  9. Myxococcus xanthus [ncbi taxid: 34]
  10. Rhodobacter capsulatus [ncbi taxid: 1061]
  11. Rhodobacter sphaeroides [ncbi taxid: ]
  12. Salvia officinalis [ncbi taxid: 38868]
  13. Streptomyces griseus [ncbi taxid: 1911]
  14. Tanacetum vulgare [ncbi taxid: 128002]
  15. Streptomyces griseus [ncbi taxid: 1911]

Pathway Synthetic

pathway id name
BioCyc:TRYPANO_POLYISOPRENSYN-PWY polyisoprenoid biosynthesis (E. coli)
BioCyc:LEISH_PWY-5123 trans, trans-farnesyl diphosphate biosynthesis I
BioCyc:LEISH_POLYISOPRENSYN-PWY polyisoprenoid biosynthesis (E. coli)
BioCyc:LEISH_PWY3IU-93 superpathway of sterol biosynthesis
BioCyc:TRYPANO_PWY-5123 trans, trans-farnesyl diphosphate biosynthesis I
PathBank:SMP0000974 Secondary Metabolites: Methylerythritol Phosphate and Polyisoprenoid Biosynthesis
Plant Reactome:R-HVU-1119274 Myrcene biosynthesis
Plant Reactome:R-OAU-2744345 Metabolism and regulation
Plant Reactome:R-OAU-1119593 Oleoresin monoterpene volatiles biosynthesis
Plant Reactome:R-TAE-2744344 Secondary metabolism
Plant Reactome:R-TAE-1119274 Myrcene biosynthesis
Plant Reactome:R-FVE-1119593 Oleoresin monoterpene volatiles biosynthesis
Plant Reactome:R-MES-2744345 Metabolism and regulation
Plant Reactome:R-MES-1119593 Oleoresin monoterpene volatiles biosynthesis
Plant Reactome:R-TDI-2744345 Metabolism and regulation
Plant Reactome:R-DRO-2744345 Metabolism and regulation
Plant Reactome:R-DRO-1119593 Oleoresin monoterpene volatiles biosynthesis
Plant Reactome:R-PTI-2744345 Metabolism and regulation
Plant Reactome:R-GMA-2744345 Metabolism and regulation
Plant Reactome:R-GMA-2744344 Secondary metabolism
View All Pathways