3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)

Bollivar DW. Recent advances in chlorophyll biosynthesis. Photosynth Res. 2006 Nov;90(2):173–94. doi: 10.1007/s11120-006-9076-6. PMID: 17370354.; Gough SP, Petersen BO, Duus JØ. Anaerobic chlorophyll isocyclic ring formation inRhodobacter capsulatusrequires a cobalamin cofactor. Proc. Natl. Acad. Sci. U.S.A. 2000 Jun 06;97(12):6908–13. doi: 10.1073/pnas.97.12.6908.

Metabolites

5'-Deoxyadenosine

Formula: C10H13N5O3 (251.10183480000003)

CAS ID: 4754-39-6

CO2

Formula: CO2 (43.98983)

CAS ID: 124-38-9

Copper

Formula: Cu (62.929599)

CAS ID: 7440-50-8

H+

Formula: H (1.0078246)

CAS ID: 12408-02-5

H2O

Formula: H2O (18.0105642)

CAS ID: 7732-18-5

Magnesium cation

Formula: Mg (23.98505)

CAS ID: 22537-22-0

Mercury(2+)

Formula: Hg (201.970632)

CAS ID: 14302-87-5

N-Ethylmaleimide

Formula: C6H7NO2 (125.0476762)

CAS ID: 128-53-0

Phenylglyoxal

Formula: C8H6O2 (134.0367776)

CAS ID: 1074-12-0

iodoacetamide

Formula: C2H4INO (184.9337644)

CAS ID: 144-48-9

ATP(4-)

Formula: C10H12N5O13P3 (502.9644492)

CAS ID:

ADP(3-)

Formula: C10H12N5O10P2 (424.0059412)

CAS ID:



Enzyme

EC Number name full name note
1.21.98.3 anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase magnesium-protoporphyrin-IX 13-monomethyl ester,S-adenosyl-L-methionine:H2O oxidoreductase (hydroxylating)
1.3.7.7 ferredoxin:protochlorophyllide reductase (ATP-dependent) ATP-dependent ferredoxin:protochlorophyllide-a 7,8-oxidoreductase
1.3.98.3 coproporphyrinogen dehydrogenase coproporphyrinogen-III:S-adenosyl-L-methionine oxidoreductase (decarboxylating)
6.6.1.1 magnesium chelatase Mg-protoporphyrin IX magnesium-lyase


Proteins

Protein ID name full name
O30819 bchI Magnesium-chelatase 38 kDa subunit
O34845 bchD Magnesium-chelatase 60 kDa subunit
P0CY53 bchL Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein
P26163 bchB Light-independent protochlorophyllide reductase subunit B
P26164 bchN Light-independent protochlorophyllide reductase subunit N
P26168 bchE Anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase
P33770 hemN Coproporphyrinogen III oxidase, anaerobic 1
Q9RFD5 bchH Magnesium-chelatase subunit H