L-Homocysteine (BioCAD00000013050)

{$topic}

Metabolite Card

Formula: C4H9NO2S (135.0354)
SMILES: N[C@@H](CCS)C(O)=O

Synonyms [en]

L-Homocysteine; L-2-Amino-4-mercaptobutyric acid; homocysteine; Hcy; homo-cys; (2S)-2-amino-4-sulfanylbutanoic acid

Reviewed

Last reviewed on 2024-06-28.

Cite this Page

L-Homocysteine. 数据之源,洞见之始. SMRUCC genomics institute, a synthetic life researcher from China. https://biocad_registry.innovation.ac.cn/s/(-)-arctiin (retrieved 2026-01-03) (CAD Registry RN: BioCAD00000013050). Licensed under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).

Note

Homocysteine (CAS: 454-29-5) is a sulfur-containing amino acid that arises during methionine metabolism. Although its concentration in plasma is only about 10 micromolar (uM), even moderate hyperhomocysteinemia is associated with an increased incidence of cardiovascular disease and Alzheimer's disease. Elevations in plasma homocysteine are commonly found as a result of vitamin deficiencies, polymorphisms of enzymes of methionine metabolism, and renal disease. It has been identified as a uremic toxin according to the European Uremic Toxin Working Group (PMID: 22626821). Pyridoxal, folic acid, riboflavin, and vitamin B(12) are all required for methionine metabolism, and deficiency of each of these vitamins result in elevated plasma homocysteine. A polymorphism of methylenetetrahydrofolate reductase (C677T), which is quite common in most populations with a homozygosity rate of 10-15 %, is associated with moderate hyperhomocysteinemia, especially in the context of marginal folate intake. Plasma homocysteine is inversely related to plasma creatinine in patients with renal disease. This is due to an impairment in homocysteine removal in renal disease. The role of these factors, and of modifiable lifestyle factors, in affecting methionine metabolism and in determining plasma homocysteine levels is discussed. Homocysteine is an independent cardiovascular disease (CVD) risk factor modifiable by nutrition and possibly exercise. Homocysteine was first identified as an important biological compound in 1932 and linked with human disease in 1962 when elevated urinary homocysteine levels were found in children with mental retardation. This condition, called homocystinuria, was later associated with premature occlusive CVD, even in children. These observations led to research investigating the relationship of elevated homocysteine levels and CVD in a wide variety of populations including middle age and elderly men and women with and without traditional risk factors for CVD (PMID: 17136938 , 15630149). Moreover, homocysteine is found to be associated with cystathionine beta-synthase deficiency, cystathioninuria, methylenetetrahydrofolate reductase deficiency, and sulfite oxidase deficiency, which are inborn errors of metabolism.

Entity Information

DBLinks

Other DBLinks
  • CAS Registry Number: 462-10-2
  • CAS Registry Number: 6027-13-0
  • PubChem: 3455
  • PubChem: 91552
  • ChEBI: ChEBI:17230
  • ChEBI: ChEBI:17588
  • HMDB: HMDB0000742
  • KEGG: C00155
  • KEGG: C01817
  • BioCyc: HOMO-CYS
  • NCBI MeSH: Homocysteine
  • Wikipedia: Homocysteine
  • DrugBank: DB04422
  • RefMet: RM0136837
  • MoNA: KNA00053
  • MoNA: KNA00056
  • MoNA: KNA00408
  • MoNA: KNA00409
  • MoNA: KNA00410
  • MoNA: KZ000227
  • MoNA: PM000930
  • MoNA: PM000982
  • Metlin: METLIN_3256

Class / Ontology

Metabolic Network
ID EC Number Name
KEGG:R00192 3.13.2.1 S-adenosyl-L-homocysteine hydrolase
KEGG:R00650 2.1.1.10 S-adenosyl-L-methionine:L-homocysteine S-methyltransferase
KEGG:R00946 2.1.1.13 5-methyltetrahydrofolate:L-homocysteine S-methyltransferase
KEGG:R01283 4.4.1.2 L-homocysteine hydrogen-sulfide-lyase (deaminating; 2-oxobutanoate-forming)
KEGG:R01286 4.4.1.13 L-cystathionine L-homocysteine-lyase (deaminating; pyruvate-forming)
KEGG:R01287 2.5.1.49 O-acetyl-L-homoserine:hydrogen sulfide S-(3-amino-3-carboxypropyl)transferase;
KEGG:R01288 2.5.1.48 O4-succinyl-L-homoserine:hydrogen sulfide S-(3-amino-3-carboxypropyl)transferase;
KEGG:R01289 4.2.1.22 L-serine hydro-lyase (adding homocysteine)
KEGG:R01290 4.2.1.22 L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)
KEGG:R01291 4.4.1.21 S-(5-deoxy-D-ribos-5-yl)-L-homocysteine homocysteine-lyase [(4S)-4,5-dihydroxypentan-2,3-dione-forming]
KEGG:R01292 1.8.4.1 glutathione:homocystine oxidoreductase
KEGG:R02026 O-acetyl-L-homoserine acetate-lyase (L-homocysteine forming)
KEGG:R02821 2.1.1.5 trimethylaminoacetate:L-homosysteine S-methyltransferase
KEGG:R04153 2.1.1.3 dimethylsulfonioacetate:L-homocysteine S-methyltransferase
KEGG:R04405 2.1.1.14 5-methyltetrahydropteroyltri-L-glutamate:L-homocysteine S-methyltransferase
KEGG:R08633 4.4.1.2 L-homocysteine hydrogen-sulfide-lyase
KEGG:R10305 2.5.1.134 O3-acetyl-L-serine:L-homocysteine S-(2-amino-2-carboxyethyl)transferase
KEGG:R11063 2.1.1.10 S-methyl-L-methionine:L-homocysteine S-methyltransferase
KEGG:R12505 2.8.1.16 hydrogen sulfide:L-aspartate-4-semialdehyde sulfurtransferase
KEGG:R12588 3.13.1.9 S-inosyl-L-homocysteine hydrolase (inosine-forming)
View More
Organism Source

Taxonomy Source

Pathway Synthetic

pathway id name
BioCyc:LEISH_PWY3IU-235 folate metabolism
BioCyc:LEISH_HOMOCYSDEGR-PWY cysteine biosynthesis/homocysteine degradation
BioCyc:LEISH_PWY3IU-196 methionine biosynthesis
BioCyc:TRYPANO_PWY0-781 aspartate superpathway
BioCyc:TRYPANO_PWY-724 superpathway of lysine, threonine and methionine biosynthesis II
BioCyc:TRYPANO_PWY-3841 formylTHF biosynthesis II
BioCyc:TRYPANO_P4-PWY superpathway of lysine, threonine and methionine biosynthesis I
BioCyc:TRYPANO_PWY-702 methionine biosynthesis II
BioCyc:LEISH_PWY-801 homocysteine and cysteine interconversion
BioCyc:TRYPANO_HOMOCYSDEGR-PWY cysteine biosynthesis/homocysteine degradation
BioCyc:TRYPANO_PWY-802 methionine and S-adenosylmethionine synthesis
BioCyc:TRYPANO_1CMET2-PWY formylTHF biosynthesis I
BioCyc:TRYPANO_HOMOSER-METSYN-PWY methionine biosynthesis I
Plant Reactome:R-OAU-2744345 Metabolism and regulation
Plant Reactome:R-OAU-2744343 Amino acid metabolism
Plant Reactome:R-OAU-1119349 SMM cycle
Plant Reactome:R-CME-1119400 Methionine biosynthesis II
Plant Reactome:R-FVE-5655122 Amino acid biosynthesis
Plant Reactome:R-MES-2744345 Metabolism and regulation
Plant Reactome:R-MES-2744343 Amino acid metabolism
View All Pathways